Convert long-format activity results to a source-by-sample matrix — activity_matrix • bulkMAE

Convert long-format activity results to a source-by-sample matrix

Usage

activity_matrix(
  result,
  value = "score",
  source = "source",
  sample = "condition",
  statistic = NULL,
  statistic_column = "statistic"
)

Arguments

result: A data-frame-like result returned by activity_decouple(), activity_progeny(), or activity_tf().
value, source, sample: Column names containing activity values, sources, and sample identifiers.
statistic: Optional statistic/method value to retain when a result contains multiple methods.
statistic_column: Column containing statistic/method names.

Value

A numeric source-by-sample matrix suitable for mae_add_experiment().